PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr6g0265831

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 158aa MW: 17959.1 Da PI: 7.0739

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr6g0265831	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	42.4	1.5e-13	30	88	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +r+ +NRe+ArrsR RK++ ++ L+ +++L +eN++ ++ l+ ++++ + ++e+ RcHm_v2.0_Chr6g0265831 30 RKRKRMLSNRESARRSRMRKQKHLDDLTVQMAQLRKENHQIISSLNITSQHYMNIEAEN 88 67899****************************************99999988877776 PP

Sequence ? help Back to Top
Protein Sequence Length: 158 aa Download sequence
MASSSGTSSV SSMIQNSGSE EDLQALMDQR KRKRMLSNRE SARRSRMRKQ KHLDDLTVQM 60 AQLRKENHQI ISSLNITSQH YMNIEAENSV LRAQVSELSN RLQSLNEIIA FLNANHGGFV 120 EDSSNNNFTE PSADCFFNPL NLSYLNHPIM ASAEMFQY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	30	51	RKRKRMLSNRESARRSRMRKQK
2	43	50	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	1e-54	bZIP family protein