PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr6g0268361

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 595aa MW: 65443.1 Da PI: 6.5308

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr6g0268361	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.7	6.8e-10	426	478	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 kr++r NR +A rs +RK +i eLe kv++L++e ++L +l l+ + RcHm_v2.0_Chr6g0268361 426 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSV 478 9******************************************9999987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 595 aa Download sequence
MGDTEEANSD MMQRLQSSFG TSSSSILKQP LSMDQLNIPQ FNTSQIRSRH FAQSFTGDSS 60 KRSGIPPSHP NHIPPLSPYS QIPVARPINQ TMGSQNFSLG GPTHSRSLSQ PAFFSLDSLP 120 PLSPSPYRES PSTSMSESVA VDVSMEDRDA SSHSLLPPSP FSRGNFSRVG ETLPPRKAHR 180 RSNSDIPFGF STMMQQQSLP PIAPVRGSGG LDLSMSGAEN SGMVKPAQLV KKESSWERAG 240 DNNAEGTGER KSEGEVVDDL FSAYMNLDSI DALNSSGTDD KNGNENREDM DSSRASGTKT 300 NCDSSDNEVE SSVNESGGMH RPGLNIMTDM REGIKRSAGG DIAPTTRHFR SVSMDSFMGK 360 LQFGDESPKL PPSPGTRPGQ LSPSNSIDTN SNAFSLEFGN GEFSGAEMKK IMANEKLAEI 420 AMTDPKRAKR ILANRQSAAR SKERKMRYIS ELEHKVQTLQ TEATTLSAQL TLLQRDSVGL 480 SNQNNELKFR LQAMEQQAQL RDALNEALTS EVQRLKLATT DLNGDSRPSK SMINAQRFQL 540 QQQSPQTQFN LHQQQQQQQQ QQQQQQQQQQ QQQQQQTPQQ LQQNGTTTSK PESNQ

Sequence ? help Back to Top

Protein Sequence Length: 595 aa Download sequence

MGDTEEANSD MMQRLQSSFG TSSSSILKQP LSMDQLNIPQ FNTSQIRSRH FAQSFTGDSS  60
KRSGIPPSHP NHIPPLSPYS QIPVARPINQ TMGSQNFSLG GPTHSRSLSQ PAFFSLDSLP  120
PLSPSPYRES PSTSMSESVA VDVSMEDRDA SSHSLLPPSP FSRGNFSRVG ETLPPRKAHR  180
RSNSDIPFGF STMMQQQSLP PIAPVRGSGG LDLSMSGAEN SGMVKPAQLV KKESSWERAG  240
DNNAEGTGER KSEGEVVDDL FSAYMNLDSI DALNSSGTDD KNGNENREDM DSSRASGTKT  300
NCDSSDNEVE SSVNESGGMH RPGLNIMTDM REGIKRSAGG DIAPTTRHFR SVSMDSFMGK  360
LQFGDESPKL PPSPGTRPGQ LSPSNSIDTN SNAFSLEFGN GEFSGAEMKK IMANEKLAEI  420
AMTDPKRAKR ILANRQSAAR SKERKMRYIS ELEHKVQTLQ TEATTLSAQL TLLQRDSVGL  480
SNQNNELKFR LQAMEQQAQL RDALNEALTS EVQRLKLATT DLNGDSRPSK SMINAQRFQL  540
QQQSPQTQFN LHQQQQQQQQ QQQQQQQQQQ QQQQQQTPQQ LQQNGTTTSK PESNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	1e-166	bZIP family protein