PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr6g0289641

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 442aa MW: 48194 Da PI: 6.6333

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr6g0289641	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	52.2	1.3e-16	217	270	3	56
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 ++kr+rr+ +NRe+ArrsR+RK+a++ Le+ + +L eN+aL k+l + ++ RcHm_v2.0_Chr6g0289641 217 DVKRARRMLSNRESARRSRRRKQAQMTDLETQAGQLRVENSALLKQLTDVNHKY 270 78******************************************9887766655 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MHSAFQADEI SDITETFWAS STSLQMNRSD SEWAFEQFLE EVVSAPPPPP PRAADQLTVS 60 SVASAHSSTS KREEVDEEVV EIKKPDRHLN CPPPPLPSTA PINSDQYQRE LLKSKLDLAC 120 AAVALTRASS LKPVGSGNVA QTQSILPQPS QVTSALHNKA AVYGLPQSEA DTSPLGIPAL 180 PAIQKKAQTT SGSSKDDSDD DDLEGDIEIT ENMDPADVKR ARRMLSNRES ARRSRRRKQA 240 QMTDLETQAG QLRVENSALL KQLTDVNHKY DNSVVDRRIL EANIETLRAK VKMAEESVKR 300 KTGINPLLLA MSNVPNVPRA SMASLGNPMD TSANASVPMQ PTSNHLFHPV APSINTPPHH 360 QRLDTSFPGN PSIPLVGNQQ STVGQPIVRG SNTTEVPSVQ HTASIDHMHQ QQHQQQLRPG 420 VNPCEALPVW NPQIPHAVPK NK

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MHSAFQADEI SDITETFWAS STSLQMNRSD SEWAFEQFLE EVVSAPPPPP PRAADQLTVS  60
SVASAHSSTS KREEVDEEVV EIKKPDRHLN CPPPPLPSTA PINSDQYQRE LLKSKLDLAC  120
AAVALTRASS LKPVGSGNVA QTQSILPQPS QVTSALHNKA AVYGLPQSEA DTSPLGIPAL  180
PAIQKKAQTT SGSSKDDSDD DDLEGDIEIT ENMDPADVKR ARRMLSNRES ARRSRRRKQA  240
QMTDLETQAG QLRVENSALL KQLTDVNHKY DNSVVDRRIL EANIETLRAK VKMAEESVKR  300
KTGINPLLLA MSNVPNVPRA SMASLGNPMD TSANASVPMQ PTSNHLFHPV APSINTPPHH  360
QRLDTSFPGN PSIPLVGNQQ STVGQPIVRG SNTTEVPSVQ HTASIDHMHQ QQHQQQLRPG  420
VNPCEALPVW NPQIPHAVPK NK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	239	RRSRRRKQ
2	234	239	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54620.1	5e-44	bZIP family protein