PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr6g0298231
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bZIP
Protein Properties Length: 166aa    MW: 18081 Da    PI: 10.277
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr6g0298231genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.49.8e-1685145161
                             XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                             +ke+kr +r+ +NR++A+  R+RKka++  Le +vk Le++N++L ++l++l++e + l+ 
  RcHm_v2.0_Chr6g0298231  85 DKESKRLKRLLRNRVSAQQARERKKAYLSDLEVRVKDLEQKNSELDERLSTLQNENQMLRH 145
                             689*****************************************************98865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MLQDQATSSL AASSLPSSSE RSSSSAFQLE VKEGMESDEE IRRVPEIGGE SAGASVSGRE  60
AGSVAGPDRV QVAADQRKRG RSPADKESKR LKRLLRNRVS AQQARERKKA YLSDLEVRVK  120
DLEQKNSELD ERLSTLQNEN QMLRHILKNT TASRRGGSGA NADGSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.13e-68bZIP family protein