PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr6g0301661
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bZIP
Protein Properties Length: 164aa    MW: 18445.3 Da    PI: 6.9728
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr6g0301661genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.63.7e-153088563
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                            ++ +r+q+NRe+ArrsR RK++ ++eL+  v +L +eN +    ++  ++++ ++++e+
  RcHm_v2.0_Chr6g0301661 30 RKRKRMQSNRESARRSRMRKQQHLDELTAQVTQLRKENGQILTSINITTQHYTNVEAEN 88
                            6789*************************************999999999999888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MASSSGNSSG SQLLQNSGSE GDLQHVMDQR KRKRMQSNRE SARRSRMRKQ QHLDELTAQV  60
TQLRKENGQI LTSINITTQH YTNVEAENSV LRAQMAELSQ RLESLTEILN YINGNNNNGV  120
FETEPGQLLQ TGSTAADHNS FMNPWNNSLY SNQPIMAAAD MLQY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14350RRSRMRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.14e-48bZIP family protein