PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr6g0303481
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bZIP
Protein Properties Length: 224aa    MW: 24156.1 Da    PI: 10.4197
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr6g0303481genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.63.2e-14159206552
                             CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                              r +r++kNRe+A+rsR+RK+a++ eLe + + L +eN +Lk + e++
  RcHm_v2.0_Chr6g0303481 159 VRHKRMIKNRESASRSRARKQAYTSELELELAHLREENARLKRRQEKI 206
                             699***************************************887765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MTMEDVWKDI SLASLCDHNS PAAAAGSSAS RNDSAAIRGF IFQDFMAAAS NKLTPSLATD  60
LAPLPQPPAT LLSLSSSGSD HFQHCQVQSA TATASTNTTA PPIPVTPNAQ RLHRISTIPS  120
SSVISFSNKH ANNSSEALDS SPSCKKRALE ENGENSRHVR HKRMIKNRES ASRSRARKQA  180
YTSELELELA HLREENARLK RRQEKISLAA PVAAATPPKR AHSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.11e-13bZIP family protein