PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr6g0305501

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 338aa MW: 36647.4 Da PI: 5.5946

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr6g0305501	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	56	8.9e-18	167	221	3	57
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++kr rr+ +NRe+ArrsR+RK++ ++eLe v+ L +eN++L +l ++++ RcHm_v2.0_Chr6g0305501 167 DIKRIRRMVSNRESARRSRRRKQQHLQELEGQVDILRGENSTLFMQLTDASQQYR 221 58*****************************************977766666655 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MERNSAAVHS QMTPSMFGSS WHGDHMKRSP PQLEIDEWIN HGVAADNQGE FRADRSFAET 60 DGFFGDVCSG DLSFAFKNRD MMNGFSSSGL TETLLSPQKL TPKNSSLSAT MDSQSSICVG 120 TPTSAANPIG RDNQARGATS GSSGDQSDED DFEIEAGPCG DSTNPLDIKR IRRMVSNRES 180 ARRSRRRKQQ HLQELEGQVD ILRGENSTLF MQLTDASQQY RDADTNNRVL KSDVEALRAK 240 VKLAEDMVTR GSLTSSLNQL LQGHLTTPQP LNPHTNLRGV AHVSPTITIH GEDTSYGGIA 300 ISGQNSGVGL GNVAGMTNSN MSTRIMSDSV SCVSTDMW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	182	189	RRSRRRKQ
2	184	189	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	2e-57	bZIP family protein