PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr6g0308031

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 440aa MW: 47132.7 Da PI: 10.3759

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr6g0308031	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.9	7.1e-16	362	416	5	59
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN+ Lkk+ +e+ ++ ++ RcHm_v2.0_Chr6g0308031 362 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENENLKKKQDEMMELQKNQ 416 79******************************************99999887665 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MGANMNFKGF MTDLQGDGGG RPPVNNSNSN SNNNALARQS SIYSLTFDEL QNTMGGPGKD 60 FGSMNMDELL KSIWTAEETQ TVLLPTGGVV TGQDGFNQGL PLPLQRQGSL TLPRTLSQKT 120 VDEVWRNLSS KEGNGGPGGS NVVQRQQTLG EMTLEEFLVR AGVVREDGPN GSKPGNNGSG 180 FFGELARFGN STGGGLGFGF QQPDRSVGVM GTGRISENGN QVPNQSSNLP LNANGVRSQQ 240 QQQIQIFPKQ QPVTYSTSQM GMGPNSQLGS PGMRGGILGI GEQGMSNALV QSPVLQGGGM 300 GMVGLGGGNG RVAAVSPANQ LSSDGIGKSN GTDTSSVSPM PYVFNNGFRG RKGGPVEKVV 360 ERRQRRMIKN RESAARSRAR KQAYTMELEA EVAKLKEENE NLKKKQDEMM ELQKNQDMEI 420 QNLQRGGKRR CLRRTQTGPW

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MGANMNFKGF MTDLQGDGGG RPPVNNSNSN SNNNALARQS SIYSLTFDEL QNTMGGPGKD  60
FGSMNMDELL KSIWTAEETQ TVLLPTGGVV TGQDGFNQGL PLPLQRQGSL TLPRTLSQKT  120
VDEVWRNLSS KEGNGGPGGS NVVQRQQTLG EMTLEEFLVR AGVVREDGPN GSKPGNNGSG  180
FFGELARFGN STGGGLGFGF QQPDRSVGVM GTGRISENGN QVPNQSSNLP LNANGVRSQQ  240
QQQIQIFPKQ QPVTYSTSQM GMGPNSQLGS PGMRGGILGI GEQGMSNALV QSPVLQGGGM  300
GMVGLGGGNG RVAAVSPANQ LSSDGIGKSN GTDTSSVSPM PYVFNNGFRG RKGGPVEKVV  360
ERRQRRMIKN RESAARSRAR KQAYTMELEA EVAKLKEENE NLKKKQDEMM ELQKNQDMEI  420
QNLQRGGKRR CLRRTQTGPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	2e-99	bZIP family protein