PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr6g0309961

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 157aa MW: 18071.2 Da PI: 8.7284

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr6g0309961	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	38.8	2e-12	68	120	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++ rr+ +NRe+ArrsR RKk +e L+e++ L+ eN++Lk++l ++++ RcHm_v2.0_Chr6g0309961 68 RKRRRMTSNRESARRSRWRKKRHLEDLTEEANRLKMENRELKNRLGLVAQKCY 120 5779999***************************************9999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 157 aa Download sequence
MFTSAAMFFN GAEEAVEFQC PVQETGLTAT IEELMSLLQE GNSNSNSGSP NSGSEGSNGR 60 GVYSLDERKR RRMTSNRESA RRSRWRKKRH LEDLTEEANR LKMENRELKN RLGLVAQKCY 120 VTWRENERLE SESLALWARL SDLNQVLVAM QTMRSQY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	68	72	RKRRR
2	68	89	RKRRRMTSNRESARRSRWRKKR
3	69	90	RKRRRMTSNRESARRSRWRKKR
4	70	91	RKRRRMTSNRESARRSRWRKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22850.1	1e-20	bZIP family protein