PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr7g0177751
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ZF-HD
Protein Properties Length: 232aa    MW: 25691.7 Da    PI: 8.495
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr7g0177751genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer92.24.7e-293586457
             ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                             +Y+eCl+NhAaslG++a+DGCgEf+ +  +++++ +l+CaACgCHRnFHRr +
  RcHm_v2.0_Chr7g0177751 35 DVYRECLRNHAASLGSYATDGCGEFTLD--DTSSPGGLQCAACGCHRNFHRRVT 86
                            58*************************8..5578******************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MRLCFCTLVY HQAHSYLRLR EPEKREMEGE NSSNDVYREC LRNHAASLGS YATDGCGEFT  60
LDDTSSPGGL QCAACGCHRN FHRRVTYAPG VGRSSGGGTA HHRVISCSSR GDLHHEMMTS  120
QELIDYNVGG GGGAAARQMM VVESPDSGDR SGSGRKRFRS KFTVEQKEKM LAFAEKLGWK  180
LQRKDLEDEI ERFCRSIGVS RQVFKVWMHN HKNLSSSSSA STTANASSLT TQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.11e-33ZF-HD family protein