PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr7g0195031

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

ERF

Protein Properties

Length: 187aa MW: 20420.9 Da PI: 9.0947

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr7g0195031	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	30.2	1.1e-09	12	39	29	56
AP2 29 krfslgkfgtaeeAakaaiaarkklege 56 r++lg+++tae Aa a+++a+ kl+ge RcHm_v2.0_Chr7g0195031 12 MRVWLGTYDTAEAAAYAYDRAAYKLRGE 39 69************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
MGRRDQTPQN RMRVWLGTYD TAEAAAYAYD RAAYKLRGEY ARLNFPNLKD PTKLGFADGS 60 RLNAVKASVD AKIQAICQKV KREKAKKNNA KKSSSGSVKT EKVTKVDSPS SSSSHLTFYD 120 GLGQELLSSP TPTGSEGRCE NSSTPSVSND GPISVAMAEM EDLEFEGCSL ARMPSFDPEL 180 IWKVLAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64380.1	5e-21	ERF family protein