PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr7g0195651

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 279aa MW: 30692.9 Da PI: 6.64

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr7g0195651	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	56.6	5.5e-18	136	198	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ek+lkre+rkq NRe+ArrsR RK+ae eeL + +++L++e ++Lk+el++lk ++k++ e+ RcHm_v2.0_Chr7g0195651 136 EKQLKREKRKQANRESARRSRMRKQAEYEELVKSCDSLSTEQMDLKSELDQLKVDAEKMRLEN 198 89********************************************************99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MDQDVTKKFK GLDGHAVPIA YVSSKGNSGH PVLEASKSFE ENKDGLTGGA DGNTRADHHR 60 QGKNGSYSVP TSDNDVKDHP QVHPNNEGEI NRNFATSNDL VRVPIPSPYE KIATSTPFFS 120 PSAGERLPFD AMVLDEKQLK REKRKQANRE SARRSRMRKQ AEYEELVKSC DSLSTEQMDL 180 KSELDQLKVD AEKMRLENAA LRAQLKNAQV MQEGGNASPK TEGDFTLPND AKNILSNLGS 240 VSSNAPPDCQ THETSVSETV TRLRQLLESS SRTDAVAAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	153	160	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	1e-24	bZIP family protein