PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr7g0211731

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 404aa MW: 45741.6 Da PI: 7.1903

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr7g0211731	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.9	4.2e-32	230	283	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ RcHm_v2.0_Chr7g0211731 230 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 283 9****************************************************7 PP
2	Myb_DNA-binding	48.4	2.1e-15	231	282	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ RcHm_v2.0_Chr7g0211731 231 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 282 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MELFPAQPDL SLQISPPNTK PTSSGSWRRS AEEEEAAEVD LGFWKRALDS RNSSISSDTF 60 SDLSLSNPTR LSHDQYSNTN RINHFHHQNH FGLQNGHNGN TNGLLFHAFQ QNQFLNPQHQ 120 LHHHQRVFEQ QHQQEQQGGY LGPELGFLRP IRGIPVYQNP PPPNPHLHHH HPPPNLFPFS 180 AQNIKPNLNL DATATSLSSS NSTLSSPSSN PFLRSRFLSR FPAKRSMRAP RMRWTTTLHA 240 RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTDKA AATSGQSELY 300 ENASSGDTTE DIMLDNINQN PTRSSEQGRP NHAQDKEYYG GLWSNSSSRE AWLHGNKPKD 360 DSAGNMPSLL DDEKDMMDPK DLRSSFERIS DMICVSEWEL GMKR

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MELFPAQPDL SLQISPPNTK PTSSGSWRRS AEEEEAAEVD LGFWKRALDS RNSSISSDTF  60
SDLSLSNPTR LSHDQYSNTN RINHFHHQNH FGLQNGHNGN TNGLLFHAFQ QNQFLNPQHQ  120
LHHHQRVFEQ QHQQEQQGGY LGPELGFLRP IRGIPVYQNP PPPNPHLHHH HPPPNLFPFS  180
AQNIKPNLNL DATATSLSSS NSTLSSPSSN PFLRSRFLSR FPAKRSMRAP RMRWTTTLHA  240
RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTDKA AATSGQSELY  300
ENASSGDTTE DIMLDNINQN PTRSSEQGRP NHAQDKEYYG GLWSNSSSRE AWLHGNKPKD  360
DSAGNMPSLL DDEKDMMDPK DLRSSFERIS DMICVSEWEL GMKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	1e-61	G2-like family protein