PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr7g0212131

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 411aa MW: 43677.2 Da PI: 6.8553

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr7g0212131	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	69.8	4.2e-22	308	370	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L+ eN +L++e+++++ e+++l se+ RcHm_v2.0_Chr7g0212131 308 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLKDENATLRSEVNRIRSEYEQLLSEN 370 89**********************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MGSSEMDKPA KEKEKELKTT PPTTQEQQSA TTSAGTVNPD WSGFQAYSPM PPHGFMASSP 60 QAHPHPYMWG VQHIMPPYGT PPHPYVAMYP HGGLYAHPSM PPGSYPFSPF AMPSPNGIVE 120 ASGNTPGSIE ADGKPSEAKE KLPIKRSKGS LGSLNMITGK NNELPKTSGA SANGVYSKSA 180 ESGSEGTSEG SDANSQSDSQ LKSGGRGDSL EGDASQNGGS AHNSQNGTPN SHAVLNPTMA 240 IVPMTAGGAP IAVSGPATNL NIGMDYWGAP SSAMPAIRGK VPATPVAGGL VTPGSRDGAQ 300 SQLWLQDERE LKRQRRKQSN RESARRSRLR KQAECDELAQ RAEVLKDENA TLRSEVNRIR 360 SEYEQLLSEN ASLKERLGEI PGHEDLRSGR SDQHLSNDTN QIAQTELHGG H

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MGSSEMDKPA KEKEKELKTT PPTTQEQQSA TTSAGTVNPD WSGFQAYSPM PPHGFMASSP  60
QAHPHPYMWG VQHIMPPYGT PPHPYVAMYP HGGLYAHPSM PPGSYPFSPF AMPSPNGIVE  120
ASGNTPGSIE ADGKPSEAKE KLPIKRSKGS LGSLNMITGK NNELPKTSGA SANGVYSKSA  180
ESGSEGTSEG SDANSQSDSQ LKSGGRGDSL EGDASQNGGS AHNSQNGTPN SHAVLNPTMA  240
IVPMTAGGAP IAVSGPATNL NIGMDYWGAP SSAMPAIRGK VPATPVAGGL VTPGSRDGAQ  300
SQLWLQDERE LKRQRRKQSN RESARRSRLR KQAECDELAQ RAEVLKDENA TLRSEVNRIR  360
SEYEQLLSEN ASLKERLGEI PGHEDLRSGR SDQHLSNDTN QIAQTELHGG H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	325	331	RRSRLRK
2	325	332	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-158	bZIP family protein