PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr7g0220891
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bZIP
Protein Properties Length: 378aa    MW: 42568 Da    PI: 7.9603
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr7g0220891genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.23.5e-082442901763
                             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                             A+rsR RK+++i+eLe+ v++L+ae ++   ele l+++   l +e+
  RcHm_v2.0_Chr7g0220891 244 AQRSRVRKLQYIAELERNVQALQAEGTEVSAELEFLNQQNLILSMEN 290
                             89***********************************9998887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MANSKSSSNM RNLMYSGKHP LLPPKSPFPS VSPSYADYVF SPAIGSKTIQ KPREGNAHHQ  60
RTSSESLLIE EQPSWLDDLL NEPDTPIRRG GHRRSSSDSF AYVDAINVSN IDYSAQDEYK  120
YNNMFSAPSW GTQDFDPQTD LRHASLYSEL NLVKQKNKAW ESSVSAISNP RSLSSVKDNI  180
VLHSSGSLST PQEADGVVST ASEKQDQIES GPHDAKAPSE KKDNSNAKPY ASETDAKRAK  240
QQFAQRSRVR KLQYIAELER NVQALQAEGT EVSAELEFLN QQNLILSMEN KALKQRLENI  300
AQEQLIKYLE QELLEREIGR LRALYQQQQQ QQQQQQQRPS SSHRRNNSRD LDSQFANLSL  360
KHKDANAGRD PVTGALRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.11e-101bZIP family protein