PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr7g0224461

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 272aa MW: 29537 Da PI: 5.8687

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr7g0224461	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.2	1e-14	191	249	4	62
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 +++rr++kNRe+A rsR+RK+a++ eLe v +Le+eN +L e e kke +k +e RcHm_v2.0_Chr7g0224461 191 QQKQRRMIKNRESAARSRERKQAYTVELESLVTQLEEENARLVREEAEQKKERYKKLME 249 689***************************************66555555555555544 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MASSKLVSVS TANSDLPRDS SICSLSTLIA DVDKHNHSIT MDDLLKNIYN DQPSASPPPP 60 PSMDGGASAS AVAPGRTVEE VWKEIVAGGG GGGADGEDEA AEGEADQVRA EMTLEDFLTR 120 AGAVREEDVG VGPGAVVPIG YGQFQVQQPP PPQPQGQLVY ANNNNGTTSG GGGRGTKRRA 180 VQEAPLDKAT QQKQRRMIKN RESAARSRER KQAYTVELES LVTQLEEENA RLVREEAEQK 240 KERYKKLMEN LIPVVEKRRP ARVLRRVQSM HW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44080.1	7e-33	bZIP family protein