PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr7g0231741
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 135aa    MW: 15261.3 Da    PI: 9.9561
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr7g0231741genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2561e-172166150
                     AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50
                            ++y+GVr +k +g+Wv+eIr+p   gk++r++lg++  +e+Aa+a++aa 
  RcHm_v2.0_Chr7g0231741 21 PKYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSYEAPEMAAAAYDAAL 66
                            79*****999.**********8...557********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MTQEINQTLR ADMEEVHEPA PKYRGVRKRK WGKWVSEIRE PGKKTRIWLG SYEAPEMAAA  60
AYDAALHLRG PGVSLNFPEM VDSLPRPASS SPSDVQLAAQ EAAVRFRRLP MGSFFDGGGW  120
WLQWWRGFRD GGTVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.16e-34ERF family protein