PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr7g0231881
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 125aa    MW: 13942.8 Da    PI: 8.9414
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr7g0231881genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.7e-192271255
                     AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                            +y+GVr +k +g+Wv+eIr+p   gk++r++lg++  +e+Aa+a++aa++ l+g
  RcHm_v2.0_Chr7g0231881 22 KYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSYEAPEMAAAAYDAAALHLRG 71
                            8*****999.**********8...557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MTRETNQTLP ADMKEAHEPA AKYRGVRKRK WGKWVSEIRE PGKKTRIWLG SYEAPEMAAA  60
AYDAAALHLR GPGVMLNFPE MVDSLPRLES SSPSDVQLAA QEAAIRGGFG SERFDFEPKP  120
KTEPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.12e-34ERF family protein