PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr7g0240381
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bZIP
Protein Properties Length: 310aa    MW: 34460.5 Da    PI: 6.9681
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr7g0240381genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_120.21.3e-06263284526
                             CHHHCHHHHHHHHHHHHHHHHH CS
                  bZIP_1   5 krerrkqkNReAArrsRqRKka 26 
                             +r++r++kNRe+A rsR+RK++
  RcHm_v2.0_Chr7g0240381 263 RRQKRMIKNRESAARSRARKQE 284
                             69******************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MDDRTFVSGN GDEEPQFPPL ARQGSNYNLT LDCNEVQSNL GNISKPLNTN MAHLDELLKN  60
VISVDQEGQL LQNPSSSPSS SLPTSLFLGN FNLNGPLMSS KKKTMDQVWK EIVHHDHHPL  120
NLNSAAADES LHHQRMTTIG ESTSATTPPD HLLVRAGILN AHPTMPIDPT AAVSQQADWF  180
QFQVAAATQQ QMTMLDSNFK VCESVFENSS SAMNLDTYSE NHQVGMSFPM PAISAASSSE  240
SQATHAQRKR NYSDEMKEKS IERRQKRMIK NRESAARSRA RKQEVEILLS SNPTKSMPKH  300
QLRRISSASF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.31e-19bZIP family protein