PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr7g0240401

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 372aa MW: 42298.2 Da PI: 6.26

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr7g0240401	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37.3	6e-12	80	115	3	38
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 ++k++rr+++NReAAr+sR RKka++++Le+ +L RcHm_v2.0_Chr7g0240401 80 ADKVQRRLEQNREAARKSRMRKKAYVQQLETSRLKL 115 79****************************854444 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MLQESMNYPS TQFATSRQMG IYEPFRQVGV WRETFSGGYG SNIGASTIAE VDSGQENKIG 60 FGSHESMGPS GNDQESNRSA DKVQRRLEQN REAARKSRMR KKAYVQQLET SRLKLAQLEL 120 ELDRTRKQVA YGGSSFGGSH MGYNGIVNSG ITTFELEYGH WVEEQHRQNN ELRKALQEHA 180 TEIELRLLVE GGLNHYATLF RMKADAAKAD IFYLLSGIWR TSVERYFHWI GGFRPSELLN 240 IIEPQLEPLT DPQPLDFYNL RQSSQQAEDA LSQGMDKLQQ TLAKTLEADQ IWSGETYGSQ 300 MAAAFEKFEA LESFVSQADH LRQQTLQQMS RILTTHQAAR GLLALGEYFE RLRALSSLWA 360 ARPREPTESY AF

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MLQESMNYPS TQFATSRQMG IYEPFRQVGV WRETFSGGYG SNIGASTIAE VDSGQENKIG  60
FGSHESMGPS GNDQESNRSA DKVQRRLEQN REAARKSRMR KKAYVQQLET SRLKLAQLEL  120
ELDRTRKQVA YGGSSFGGSH MGYNGIVNSG ITTFELEYGH WVEEQHRQNN ELRKALQEHA  180
TEIELRLLVE GGLNHYATLF RMKADAAKAD IFYLLSGIWR TSVERYFHWI GGFRPSELLN  240
IIEPQLEPLT DPQPLDFYNL RQSSQQAEDA LSQGMDKLQQ TLAKTLEADQ IWSGETYGSQ  300
MAAAFEKFEA LESFVSQADH LRQQTLQQMS RILTTHQAAR GLLALGEYFE RLRALSSLWA  360
ARPREPTESY AF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77920.1	1e-152	bZIP family protein