PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr7g0241461
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bZIP
Protein Properties Length: 149aa    MW: 17161.1 Da    PI: 4.7408
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr7g0241461genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.18e-131873358
                            XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58
                            ++k+ +++q+NRe+ArrsR +K++++eeL+ ++  L+  N +  + ++   k +++
  RcHm_v2.0_Chr7g0241461 18 DDKKRKKMQSNRESARRSRMKKQKRVEELTVEISRLQISNGQIGQSIDAKDKAYSE 73
                            589**********************************9999988888777666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MSSVQRQSSS GSDGSVVDDK KRKKMQSNRE SARRSRMKKQ KRVEELTVEI SRLQISNGQI  60
GQSIDAKDKA YSEVEAWNNV MRAQEKELTD RLRYLESIEQ TFVEFSGVFD EDINNDMAEM  120
QDSLLNPWQL PYSTQPITAS SADMFLDWP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12024KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.12e-34bZIP family protein