PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co7961544.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family Trihelix
Protein Properties Length: 138aa    MW: 15390.3 Da    PI: 8.7505
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co7961544.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix59.68e-193602886
                   trihelix 28 kplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                               + lWee++  m + gf rs  +Ckekwen+nk++k+  +++kkr +++ +tc+yf++le
  Rmu_co7961544.1_g000001.1  3 GSLWEEIALGMNRMGFDRSGRKCKEKWENMNKYFKRAITNDKKR-PTNAKTCQYFNELE 60
                               679***************************************98.88999*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
SHGSLWEEIA LGMNRMGFDR SGRKCKEKWE NMNKYFKRAI TNDKKRPTNA KTCQYFNELE  60
LLYKNGLLNL GNGFSPTSSL GNGFSCTSNQ KETRSENESQ QCVLSNVDTS LLTCATIPSV  120
LNSNEAAERT RAVVSPAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.21e-21Trihelix family protein