PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co7984152.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 115aa    MW: 13210.2 Da    PI: 10.9391
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co7984152.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR132.92.1e-104593890
                       FAR1 38 egkreeekkk..tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
                               +gk++ e+++  ++++  +r+ tr +C+a+++ ++ k +g+++v ++ +eHnH+la
  Rmu_co7984152.1_g000001.1  4 SGKKSGEDEHgkKRQRPPQRNITRGNCQARITARRCKeSGVFRVVQFITEHNHALA 59
                               56666655552233555599***************999****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
MKRSGKKSGE DEHGKKRQRP PQRNITRGNC QARITARRCK ESGVFRVVQF ITEHNHALAT  60
TEFVPFLRSH RKVRDHDVAQ VTELKKVSFG TCRAYELLVH QAGGHEFVGF LIKDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-10FAR1 family protein