PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co7985966.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 120aa    MW: 13343.7 Da    PI: 5.6303
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co7985966.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.95.5e-142351247
                               HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                               ++ a++ +G++ W++Iar ++ gRt++ +k++w++ 
  Rmu_co7985966.1_g000001.1  2 IIAAHTIHGNK-WAAIARLLP-GRTDNAIKNHWNST 35
                               689********.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
MIIAAHTIHG NKWAAIARLL PGRTDNAIKN HWNSTLRRRD PDRMKSESGN MVEDVSLDKT  60
IASSEETLSN GDVNSSKSTE GKEVSSLEYT DDQHEDKVST DGLYGNEARE PCTLFRPVAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09230.18e-34MYB family protein