PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8001468.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 77aa    MW: 8760.98 Da    PI: 9.859
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8001468.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.55.4e-12448347
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                               +W +eE+  ++ + ++lG+g+W+ Iar   k+Rt+ q+ ++ + y
  Rmu_co8001468.1_g000001.1  4 PWAEEEHRMFLIGLEKLGKGDWRGIARNYVKTRTPTQVANHAHRY 48
                               7****************************************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 77 aa     Download sequence    
RVIPWAEEEH RMFLIGLEKL GKGDWRGIAR NYVKTRTPTQ VANHAHRYFT RLSTSSSSDP  60
PHMPEEQALL LGSSMVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.12e-26MYB_related family protein