PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8006714.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 176aa    MW: 19057.3 Da    PI: 5.0929
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8006714.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.39.5e-1982132155
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                                s+y+GVr+++  g+W+AeIrdp     +   r +lg+f t+eeAa+a++  +++++g
  Rmu_co8006714.1_g000001.1  82 SKYRGVRQRP-GGKWAAEIRDP-----HlaVRLWLGTFQTEEEAARAYDTKALEFRG 132
                                89********.9*********9.....778************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
HAIIVSTLKR VIRGGVGTDN ATSQPPLPST QLPATGVTDQ VVIPFSDCDD TCQVCKMGKD  60
NCLGCGMFPP SEQDKGKKVK TSKYRGVRQR PGGKWAAEIR DPHLAVRLWL GTFQTEEEAA  120
RAYDTKALEF RGADRAKLNF PPSWETGTTS GAMADETKVQ TSPVGESSAA EEEEEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.19e-27ERF family protein