PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8007914.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family GeBP
Protein Properties Length: 177aa    MW: 18897.8 Da    PI: 5.8951
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8007914.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57370.14.4e-22121177460
                     DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirr 60 
                                 rlw e+Dei++L+G+idfkak+g +ps+++ af+ef+k+s++++vsk+ql++K rr
  Rmu_co8007914.1_g000001.1 121 GRLWGEDDEIAILKGMIDFKAKKGIDPSSNMGAFHEFLKRSLKADVSKNQLMDKTRR 177
                                69****************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
DNEEEENVNA KKPVVIPSSS VVPNPQSESA SSEDDDAAAG SETESDDINH SPSASDFTVK  60
PIVSKPVNDS SSAKPSKKPA PAPAKPAPGS KRPAESDPTP KDSRKKKKGA NGGDDEDTKK  120
GRLWGEDDEI AILKGMIDFK AKKGIDPSSN MGAFHEFLKR SLKADVSKNQ LMDKTRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.14e-17GeBP family protein