PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8020548.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 170aa    MW: 18459.7 Da    PI: 4.6652
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8020548.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.62.9e-083675547
                               -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                                  + + l++a   +G + W ++a+++g  R++k+c+ +++k+
  Rmu_co8020548.1_g000001.1 36 ADRDTLHLLEALMHYGDD-WGKVAQHVG--RSEKECVAHFLKL 75
                               55567789********88.********8..**********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MTLCARCYVR GNYQIGVNSS DFRRVEINEE TGDGWADRDT LHLLEALMHY GDDWGKVAQH  60
VGRSEKECVA HFLKLPFADK PIDDLDSERL DGSGVSPLKE GNGDDEVGLE SKRMRLTPLA  120
DASNPIMAQT AFLSALAGVK AAEAAARAAV TTLCEADYET SRMSVGPRGV