PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8024742.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family G2-like
Protein Properties Length: 167aa    MW: 19190.4 Da    PI: 10.1724
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8024742.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.63.2e-094194245
                               SSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT.....TTS-HHHHHHHHH CS
            Myb_DNA-binding  2 grWTteEdellvdavkqlGgg.....tWktIartmg.....kgRtlkqcksrwq 45
                                +WT e + + v+av qlGg      t+k++ + m      +g+t k++ ++++
  Rmu_co8024742.1_g000001.1 41 SPWTLEHHRRVVEAVIQLGGLsnsktTPKAVLKLMDeedrcQGLTTKMIAHHLL 94
                               58*****************88*******************************85 PP
2G2-like38.82.1e-124293550
                    G2-like  5 rWtpeLHerFveaveqLGG..sekAtPktilelmk....vkgLtlehvkSHL 50
                                Wt e H+r veav qLGG  + k+tPk++l+lm+     +gLt + ++ HL
  Rmu_co8024742.1_g000001.1 42 PWTLEHHRRVVEAVIQLGGlsNSKTTPKAVLKLMDeedrCQGLTTKMIAHHL 93
                               5******************434689*********83333579*******998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
SFYLDFHISL LGVLQKRSEA LFSSNKVTLE SLYVAPKKMS SPWTLEHHRR VVEAVIQLGG  60
LSNSKTTPKA VLKLMDEEDR CQGLTTKMIA HHLLGLYHLQ KETQRLMAFG MAGGEEEREL  120
SLRELQYLVF KALPLQRNNV LYTNVKDPLL RQHLGLLKQV NMAHRIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62670.12e-06ARR-B family protein