PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8032686.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 126aa    MW: 14436.2 Da    PI: 9.4339
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8032686.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.81.1e-192181257
                               T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                               r+R+t+t+ qle+Le+ + + n +p +++ +e++ +l    ++te++V++WFqNrRa+ k+
  Rmu_co8032686.1_g000001.1 21 RQRWTPTSLQLEILERIYDEaNGTPGKHRVKEITIELsqhgQVTETNVYNWFQNRRARSKR 81
                               89*****************99**************************************97 PP
2Wus_type_Homeobox956.3e-312083265
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               ar+RWtPt+ Q++iLe++y+++  tP k+++++it eL+++G+++++NV++WFQNr+aR+++kq
  Rmu_co8032686.1_g000001.1 20 ARQRWTPTSLQLEILERIYDEANGTPGKHRVKEITIELSQHGQVTETNVYNWFQNRRARSKRKQ 83
                               789***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MKMGSVYGDL MASGGSKVTA RQRWTPTSLQ LEILERIYDE ANGTPGKHRV KEITIELSQH  60
GQVTETNVYN WFQNRRARSK RKQSVPARNI TESDLEPEVI SPKDKKTKPE DMYFQSPDSG  120
IENFFT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17583RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.15e-38WOX family protein