PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8043568.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 176aa    MW: 20123.4 Da    PI: 8.0813
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8043568.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR179.56.1e-2565152190
                       FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklele 84 
                                kfYn+Y+ + GF+vr+++s+k+  ++ +t+ +++Cskeg+r ++k++ ++++ ++++tr+gC+a+l+++++k+g+++v ++e++
  Rmu_co8043568.1_g000001.1  65 KFYNNYGGKHGFNVRIRNSRKN-IENFVTWVRYCCSKEGFRIKDKRR-TNASYSQPVTRCGCQAHLTIQLQKNGNFKVVSFEKN 146
                                6******************999.6666****************9999.99999******************************* PP

                       FAR1  85 HnHela 90 
                                HnH+l 
  Rmu_co8043568.1_g000001.1 147 HNHPLI 152
                                ****96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MDNANCTSLG NQPTSNTKDL QGKEQCDHSH CEPTDDLHVV NENNEEAIEE VILGKEFMDV  60
ESASKFYNNY GGKHGFNVRI RNSRKNIENF VTWVRYCCSK EGFRIKDKRR TNASYSQPVT  120
RCGCQAHLTI QLQKNGNFKV VSFEKNHNHP LISTPMKHLL KVNRNISEAQ KAHADD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.14e-20FAR1 family protein