PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8045116.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 167aa    MW: 18816.2 Da    PI: 8.6874
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8045116.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.7e-1957116155
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpse..ng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                + y+GVr++  +g+Wv+eIr+p+    g   ++  r +lg+f+ta eAa a+++a+k+++g
  Rmu_co8045116.1_g000001.1  57 CSYRGVRQRI-WGKWVSEIRVPNAntHGltsRKvGRLWLGTFDTAVEAAHAYDKAAKAMYG 116
                                67*****998.**********8664555986558************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MGKRPRVDET VVKWEKYSKN FDFAKDGLVN RMPRRMPTVG ARKGRMRGKG GPENLNCSYR  60
GVRQRIWGKW VSEIRVPNAN THGLTSRKVG RLWLGTFDTA VEAAHAYDKA AKAMYGPVAR  120
LNFPESLETS MSDETTESCD NASEFEDGVG EEPKQEDEVF DATVKEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.21e-23ERF family protein