PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8045644.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family M-type_MADS
Protein Properties Length: 165aa    MW: 18663.5 Da    PI: 9.0543
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8045644.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF62.25.9e-202062345
                               --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
                     SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                               i   sn qvtfskR  g++KKA+EL++LC++e+ +i+fs+ +k
  Rmu_co8045644.1_g000001.1 20 IPKRSNLQVTFSKRCSGLFKKASELCTLCGVEIVIIVFSPANK 62
                               667899**********************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MAMKSKKPNQ GRQKIVIAKI PKRSNLQVTF SKRCSGLFKK ASELCTLCGV EIVIIVFSPA  60
NKPFSFGHPS VESLISRFLT PSHLSVSRST QHPQYCREVS VEHKLNMQLT QTQGHLEAEK  120
QRGEALDKLS EDSERSSHCW WENSIEELGL DELQTLKAAL EELKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.18e-52M-type_MADS family protein