PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8046292.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 99aa    MW: 11376.7 Da    PI: 11.5125
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8046292.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.12.5e-096999135
                        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgk 35
                               + y+GVr++  +++Wv+e+r+p   +k++r++lg+
  Rmu_co8046292.1_g000001.1 69 PVYRGVRRRN-NNKWVCEVREP---NKKTRIWLGT 99
                               68*****887.8******9998...347*****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
MNNSNYQLSD SNQQSLESVS SIDKPESSSL SDTSFTTRRS PHSDGAVILA SSRPKKRAGR  60
RVFKETRHPV YRGVRRRNNN KWVCEVREPN KKTRIWLGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.16e-29ERF family protein