PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8051018.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 77aa    MW: 9092.34 Da    PI: 6.5012
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8051018.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.64.9e-121858748
                               HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                               +Ed+ l + +  +G+++W+ Ia+++   +t  qc+ rw++yl
  Rmu_co8051018.1_g000001.1 18 QEDDTLREQISIHGTENWAIIASKFK-DKTTRQCRRRWYTYL 58
                               7************************9.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 77 aa     Download sequence    
LLVLCLRLVF SHGFGDLQED DTLREQISIH GTENWAIIAS KFKDKTTRQC RRRWYTYLNS  60
DFKKGGWSPE EDLLLCE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14350.12e-35MYB family protein