PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8051662.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 130aa MW: 15674.9 Da PI: 11.9273

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8051662.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	38	3.5e-12	27	71	5	49
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 ++ rr+++NRe+ArrsR RK++ ie+L++ v L eN++L ++l Rmu_co8051662.1_g000001.1 27 RKRRRMISNRESARRSRMRKQKHIENLRTQVNRLRIENRELNNRL 71 5789**********************************9998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 130 aa Download sequence
RSGPDHAKSC PINGSKRTVS VSPVDERKRR RMISNRESAR RSRMRKQKHI ENLRTQVNRL 60 RIENRELNNR LRFVIYHFQR VHTDNDMLRA EHTMLQQKLS DIRQILVFRQ LQHMSSVWPC 120 DTVITEQTHH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	27	31	RKRRR
2	27	48	RKRRRMISNRESARRSRMRKQK
3	40	47	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49760.1	5e-21	bZIP family protein