PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8053810.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 131aa MW: 14377.3 Da PI: 11.187

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8053810.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	90.5	3.6e-28	48	111	2	65
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt 65 + +kdrhsk++T++g+Rd RvRl a++a++f+d+qd+L + ++sk+++W +++ak+ai++l+ Rmu_co8053810.1_g000001.1 48 TDQKDRHSKVYTAKGPRDHRVRLAAHTAIQFYDVQDRLRYGRPSKAVDWVIKKAKAAIDKLPPW 111 568**********************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 131 aa Download sequence
MGESHNNLHH RAMTSSSAAS RLGLSIRTAS SSIASEIVEA RGHILRATDQ KDRHSKVYTA 60 KGPRDHRVRL AAHTAIQFYD VQDRLRYGRP SKAVDWVIKK AKAAIDKLPP WNPNSISVQT 120 TSSPTVPISA A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	4e-36	TCP family protein