PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8054398.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 70aa    MW: 8072.28 Da    PI: 10.3907
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8054398.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.71.3e-181461148
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                               +g+WT eEd  lv++v+++G+g+W+  ++  g+ R++k+c++rw +yl
  Rmu_co8054398.1_g000001.1 14 KGPWTSEEDVVLVNYVQEHGPGNWRNLPKNAGLQRCGKSCRLRWTNYL 61
                               79********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    
MGRAPCCDKN GLKKGPWTSE EDVVLVNYVQ EHGPGNWRNL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.16e-45MYB family protein