PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8055130.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bHLH
Protein Properties Length: 188aa    MW: 20631.9 Da    PI: 6.7991
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8055130.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.80.00011169187321
                                HHHHHHHHHHHHHHHHHHH CS
                        HLH   3 rahnerErrRRdriNsafe 21 
                                ++h + Er+RR ++N++f+
  Rmu_co8055130.1_g000001.1 169 TKHFATERQRRVQLNDKFH 187
                                78***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
TSNPHLVNPF DTHQATNWDT TNEMQQQLPQ GPTPDLLSLF HLPSSSSVLP HSSINFPHPK  60
TPGGCFPGSF GYEALPETPP GAAASSVMYD PMFHLNQLPP QPQPPLFREL LQSLPHGYNL  120
GGSRNGSSLF SNGGDEVDDG SRQLFENGVL EFSKEMKPFG RGRGGNKGTK HFATERQRRV  180
QLNDKFHA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.12e-11bHLH family protein