PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8058120.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 188aa MW: 21642.7 Da PI: 10.0777

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8058120.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.8	6.2e-17	52	141	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 +fY++Y+ +GF rk+++ + +g i +r++ C+k+g+r+++ + + r +r t ++Ckak++v+ ++ g ++v+ ++ Rmu_co8058120.1_g000001.1 52 RFYSAYSLALGFGFRKDTKGEV--KGMIRRRQWLCNKQGTRAKKWFIlDGRGRPPRRITMVNCKAKFRVNYNEiVGAYMVKAFV 133 5**************98887..999**********9987666789999************************** PP FAR1 83 leHnHela 90 eH+Hela Rmu_co8058120.1_g000001.1 134 PEHSHELA 141 ****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence
IDNTTKGCSK EGTRADETRT DDEAFNYVPD YRRLKVEDVK AMTLKTVEDA ERFYSAYSLA 60 LGFGFRKDTK GEVKGMIRRR QWLCNKQGTR AKKWFILDGR GRPPRRITMV NCKAKFRVNY 120 NEIVGAYMVK AFVPEHSHEL ATGNQTAFIR SHRNVCKSDL PHANTMSKVS IRPCHAYEYM 180 VEQAGGYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-15	FAR1 family protein