PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8060678.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family HB-other
Protein Properties Length: 116aa    MW: 13177.2 Da    PI: 11.1066
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8060678.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox44.91.9e-141565353
                               --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
                   Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53
                               k+ ++t++q+ +Le+ ++ +++ps ++reeL kk+gLte qV+ W+  +R 
  Rmu_co8060678.1_g000001.1 15 KKSRMTRHQVATLEKTYAAEKNPSVSKREELGKKVGLTEIQVRLWYNKKRF 65
                               56679*****************************************99995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
MNRRAKDRRQ GIVAKKSRMT RHQVATLEKT YAAEKNPSVS KREELGKKVG LTEIQVRLWY  60
NKKRFEDQGK ERKEKKKRGT GAKKPPKSAL ASSCDHLAFV SADLTGIPNP DSPCKR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
129NRRAKDRR
26278KKRFEDQGKERKEKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28420.12e-08HB-other family protein