PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8081802.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 77aa    MW: 9308.38 Da    PI: 4.3086
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8081802.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM66.95.9e-21676267
                        NAM  2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkk 67
                               + GfrF Pt+eelv++yL +k+e+k+  ++ +vi+++diy++ePw+Lp+     +++++++w+fF++r+++
  Rmu_co8081802.1_g000001.1  6 TTGFRFYPTEEELVSFYLLNKLESKHqDSIRRVIPDLDIYSTEPWELPNyaaeLCRGDTEQWFFFTPRQQR 76
                               78*********************9994555677***************645543344777*******9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 77 aa     Download sequence    
MDQALTTGFR FYPTEEELVS FYLLNKLESK HQDSIRRVIP DLDIYSTEPW ELPNYAAELC  60
RGDTEQWFFF TPRQQRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.14e-33NAC family protein