PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8088552.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 90aa    MW: 10103.6 Da    PI: 9.0533
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8088552.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.11.8e-146852299
                               H.HTT...---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                         B3 22 faeeh...ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99
                               fa+e+    g+    + + l+++ gr W  ++++  +  +++   +  Wk+Fv++n+Lk+gD +vF+l++  +  +++v++fr+
  Rmu_co8088552.1_g000001.1  6 FAKECvcaRGV----RIVNLQNSAGRIWPATFTVevWSEGKQRQGRVSWKSFVHDNHLKVGDACVFELKKGcEVPTFKVHIFRA 85
                               66666554333....3699******99998887777555555556789*********************99899999***9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
KLQGAFAKEC VCARGVRIVN LQNSAGRIWP ATFTVEVWSE GKQRQGRVSW KSFVHDNHLK  60
VGDACVFELK KGCEVPTFKV HIFRAEDADA