PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8093794.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 198aa    MW: 22109.8 Da    PI: 10.7715
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8093794.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP116.53.4e-36541763124
                        TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................... 65 
                                 kkdrhski+T++g+RdRR+Rls+++a++fF Lqd+LGfdk+skt+eWLl+qa+++ik+  +                      
  Rmu_co8093794.1_g000001.1  54 CKKDRHSKISTARGLRDRRMRLSLDVARKFFGLQDMLGFDKASKTVEWLLNQAEAEIKKVKREmngqnenqssstttaagagar 137
                                69*************************************************************666554333322222222222 PP

                        TCP  66 ..ssssaseceaesssssasnsssg........................kaaksaakskksqksaasalnlakesrakararar 123
                                  +                 +ss++                        +                             ++ a+
  Rmu_co8093794.1_g000001.1 138 arT-----------------TSSISecevvsgtdevatddiidkvsrtsS-----------------------------SSSAK 175
                                221.................222223333333332223333333333321.............................22222 PP

                        TCP 124 e 124
                                +
  Rmu_co8093794.1_g000001.1 176 N 176
                                2 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
HHHHHHRHHH QTGTPLTATM VEGDSNKDDQ VVIGKEGEQQ QQQQKQIPMT RRSCKKDRHS  60
KISTARGLRD RRMRLSLDVA RKFFGLQDML GFDKASKTVE WLLNQAEAEI KKVKREMNGQ  120
NENQSSSTTT AAGAGARART TSSISECEVV SGTDEVATDD IIDKVSRTSS SSSAKNRIKR  180
TVRQPKKSAL FNPLAKAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.19e-27TCP family protein