PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8096516.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 174aa    MW: 18918.1 Da    PI: 4.7797
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8096516.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.8e-1978128155
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                s+y+GVr+++  g+W+AeIrdp+    r  r++lg+f t+eeAa+a++  +++++g
  Rmu_co8096516.1_g000001.1  78 SKYRGVRQRP-GGKWAAEIRDPR----RaVRVWLGTFQTEEEAARAYDTKALQFRG 128
                                89********.9*********82....48***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
LKRVIRGGVG TDNAPSQPPP PSTQLPATGD TDQVVIPFSD CDDTCQVCKM GKDDCLGCGL  60
FPPSEQELQD KGKKVKTSKY RGVRQRPGGK WAAEIRDPRR AVRVWLGTFQ TEEEAARAYD  120
TKALQFRGAD RAKLNFPPSW DTGTTSGAMA DETKVQTSPV GESSAAEDEE EMDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.11e-26ERF family protein