PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8110338.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

GRAS

Protein Properties

Length: 163aa MW: 18529.4 Da PI: 6.7777

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8110338.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	45.7	1.1e-14	116	163	3	50
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALa 50 + L++cA+av+s d+++a++lL+++++++sp+gd++qRla+yf+ +L+ Rmu_co8110338.1_g000001.1 116 TMLTQCAQAVASYDQRNASELLKQIRQHSSPYGDATQRLAHYFADGLE 163 689*****************************************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence
MLQGPQTLIG SNLVSEQQSD WYNSANRSEA KKNRQRQDAH CLEEWRSNKQ SVAYFTDDSE 60 PQEMFDKALL FQGVNHEAEC SSHHDSFNEG SGQCKVSKPA RSKRQNKKEK VVDLCTMLTQ 120 CAQAVASYDQ RNASELLKQI RQHSSPYGDA TQRLAHYFAD GLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G29060.1	1e-26	GRAS family protein