PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8131344.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 157aa    MW: 17864.6 Da    PI: 4.4403
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8131344.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR147.46.3e-1586135150
                       FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktek 50 
                                +fYn+YAk++GFs+r+++ ++sk++++i++r+f+Cskeg+ +e++ k+++
  Rmu_co8131344.1_g000001.1  86 NFYNAYAKHIGFSIRVNSYYRSKKDNSIISREFCCSKEGFCRERRAKNDS 135
                                6***************************************9999887222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MQVWTEHYVM EVEVSSEEVV DSYVSLEDEG YEHCVVEDVE VRVVLDDVKE DNGDIDLVQY  60
MAGGDNGGII EPTLDMEFDS EDDARNFYNA YAKHIGFSIR VNSYYRSKKD NSIISREFCC  120
SKEGFCRERR AKNDSSDGAK TRRARGLGPS LGKVSRH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.15e-16FAR1 family protein