PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8134984.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ZF-HD
Protein Properties Length: 182aa    MW: 19220.4 Da    PI: 8.172
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8134984.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.82.3e-32103160260
                ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                                ++vrY+eClkNhAa++Gg+++DGCgEfmp  geegt +alkCaAC+CHRnFHR+ev+ e
  Rmu_co8134984.1_g000001.1 103 SNVRYRECLKNHAANIGGNVFDGCGEFMPC-GEEGTLEALKCAACDCHRNFHRKEVDGE 160
                                689**************************9.999*********************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MRTSGSALSY GATHLTKESS GGGEKRRLGN IHNGTPTALS AFTATHQTLD HHHPLQPHHV  60
QPVPLTTRDL DPDRVGSTAV APSGGVLSGG PKSKTPSSTS TTSNVRYREC LKNHAANIGG  120
NVFDGCGEFM PCGEEGTLEA LKCAACDCHR NFHRKEVDGE TTPFGPGSRS RSIMLSPLQL  180
PP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.11e-31ZF-HD family protein