PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8136506.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family G2-like
Protein Properties Length: 206aa    MW: 22409.2 Da    PI: 9.4713
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8136506.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.32.4e-3051104155
                    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                +prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  Rmu_co8136506.1_g000001.1  51 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 104
                                59*******************.********************************8 PP
2Myb_DNA-binding49.41.1e-1553103148
                                TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                                r+ WT+++++++vd+v+ lG +   +ktI++ m+ +g+t++++ s++qky+
  Rmu_co8136506.1_g000001.1  53 RLVWTPQLHKRFVDVVAHLGIKnaVPKTIMQLMNvEGLTRENVASHLQKYR 103
                                789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
ETEPYGGGGG REGSDSRKSR RVDSPEEADS ALRIENSSGG GDDPSGRAVK RPRLVWTPQL  60
HKRFVDVVAH LGIKNAVPKT IMQLMNVEGL TRENVASHLQ KYRLYLKRMQ GLSNEGPSSS  120
DPLFASTPVP QSLHESGGSG PGHRQGHMPI SIPMPYPPGA MMAMPGYMGM SGGYHGFESH  180
PSYNMMQQHK YGSMVSYPPH VAPNEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.22e-57G2-like family protein