PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8137334.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 77aa    MW: 8743.32 Da    PI: 10.4791
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8137334.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.95.8e-162751897
                               --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                         B3 18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                               +p +f +eh   +++   ++l++++g++W+vk+    +++++ l++GW eF +an+++ gD+++F l+g  ++++vv+v+
  Rmu_co8137334.1_g000001.1  2 VPVDFSREHL--PQGYYNIVLKNLKGQKWKVKV--VCSGKTVKLSAGWVEFRRANQINCGDICTFDLVG--RRTMVVHVI 75
                               6889999994..235568***************..77777799***********************998..455688887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 77 aa     Download sequence    
AVPVDFSREH LPQGYYNIVL KNLKGQKWKV KVVCSGKTVK LSAGWVEFRR ANQINCGDIC  60
TFDLVGRRTM VVHVIPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24645.11e-10B3 family protein